Conferences & Workshops

Host-Pathogen Interactions: Circuits to Systems Symposium
January 23, 2017, from 8:30 am – 7 pm
Sanford Consortium for Regenerative Medicine
Organized by SDCSB, FluOMICS and FluDyNeMo
Register for the event here

Cytoscape Workshop
January 24, 2017, from 9:30 am – 12:00 pm
UC San Diego – BRF2, room 2A03
Organized by Barry Demchak
Register for the event here

Q-Bio Hawaii
February 21-24, 2017
Grand Hyatt Kauai Resort & Spa
Register for the event here

IP Workshop
March 16, 2017, from 1:30 pm – 6:00 pm
Sanford Consortium for Regenerative Medicine
Organized by Kamala Janiyani
Registration begins in Winter 2017

Math Modeling Workshop
March 27-31, 2017, from 10:00 am – 12:00 pm
UC San Diego, Bonner Hall room 2130
Organized by Dr. Lev Tsimring
Registration for the event here

Spring Systems-To-Synthesis (S2S) Meeting
April 6, 2017, from 1:30 – 6:00 pm
The Village 15 at UC San Diego
Registration begins in Spring 2017

Weekly Events

Genetics, Bioinformatics and Systems Biology Colloquium (2016-17)

qBio Seminar Series (2016-17)

Systems Biology Career Development Seminars (Spring 2017)

Monthly Events

San Diego Bioinformatics Users Series (SDBUS)

Systems Biology Club

Math Modeling Tutorial Workshop 2017

March 27 – 31, 2017, from 10 am – 12 pm

Room 2130, Bonner Hall, UC San Diego

Organizer: Dr. Lev Tsimring, BioCircuits Institute, UC San Diego

 

The Network Assembly and Mathematical Modeling Core of the San Diego Center for Systems Biology presents a series of hands-on tutorials on kinetic modeling of intracellular dynamical processes and gene regulation. The schedule and topics covered by the tutorials is as follows:

Day 1: Overview
Day 2: Deterministic modeling: model derivation, simulation, and techniques
Day 3: …

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Cytoscape Workshop 2017

Tuesday, January 24, 2017 from 9:30 am – 12:00 pm

UC San Diego Campus, BRF2 room 2A03

Organized by Barry Demchak

Please visit here to register

 

Cytoscape is the most popular software for analyzing and visualizing molecular networks and biological pathways. Cytoscape has many powerful features for integrating these networks with annotations, gene expression profiles and other state data.

In this clinic, the Cytoscape development team from Trey Ideker’s lab will try something completely new. Attendees at our recent workshops have …

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Annual Scientific Retreat 2017

DUE TO POTENTIALLY DANGEROUS WEATHER CONDITIONS NEAR LAKE ARROWHEAD, WE HAVE DECIDED TO CANCEL THIS WEEKEND’S SDCSB RETREAT.

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Q-Bio Hawaii

THE FIFTH ANNUAL WINTER Q-BIO MEETING

Quantitative Biology on the Hawaiian Islands
February 21-24, 2017
http://w-qbio.org/

 

The Winter q-bio meeting brings together scientists and engineers who are interested in all areas of q-bio. Technology is driving revolutionary changes in biology. Systems Biology has arisen as the deduction of interaction networks from -omics data generated in the wake of remarkable technological achievements. Likewise, DNA synthesis technologies are driving the development of Synthetic Biology, whereby engineered circuitry and even entire genomes can be reconstituted from …

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SDCSB’s Quarterly Systems-to-Synthesis Meeting: Fall 2016

Thursday, October 13, 2016, from 1:30 pm to 6:00 pm

Meeting Rooms on Fifteen, 15th Floor of Building 1, Village West

The SDCSB’s Quarterly Systems-to-Synthesis Meeting will feature short talks by graduate students and postdoctoral fellows from labs throughout the SDCSB followed by a happy hour. All faculty members and trainees – graduate students, postdoctoral fellows, scientists and staff members – working on SDCSB-related projects are expected to attend.

This meeting is open to the public but seats are limited so be …

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CRISPR Screening Workshop

Thursday, October 20, 2016 from 1:30 pm – 6:00 pm

Sanford Consortium for Regenerative Medicine

 

Organized by Olivier Harismendy, Kristen Jepsen and SDCSB

Sponsored by Illumina, Twist Bioscience, Flu’OMICS, and Agilent Technologies

 

Missed the event?

Review the pre-workshop installation guidelines here.
View and download the workshop slides here.

 

Pooled CRISPR based screens have become an important tool for functional genomics. Multiple laboratories in La Jolla are initiating screens and developing standard operating procedures for screen design, execution and analysis. …

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Cytoscape Clinic 2016

Wednesday, Sep 7, 2016 from 9:00 am – 1 pm

UC San Diego Campus, BRF2 room 1102

Organized by Barry Demchak

In this workshop, the Cytoscape development team will try something completely new.

Attendees at our yearly Spring workshop have requested a non-lecture format where individuals can pose problems that will be directly addressed by Cytoscape tutors and developers. This Fall workshop will be like a clinic, where a Cytoscape user signs up for a …

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Cytoscape Workshop 2016

Thursday, May 19, 2016 from 1:30 pm – 6 pm

Sanford Consortium for Regenerative Medicine

Organized by Barry Demchak

Cytoscape is the most popular software for visualizing molecular networks and biological pathways and for integrating these networks with annotations, gene expression profiles and other state data. Although Cytoscape was originally designed for biological research, now it is a general platform for complex network analysis and visualization. In this workshop, the Cytoscape development team from …

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The SDCSB’s Quarterly Systems-to-Synthesis Meeting: Spring 2016

Thursday, April 14, 2016, from 1:30 pm to 5:30 pm

Meeting Rooms on Fifteen, 15th Floor of Building 1, Village West

The SDCSB’s Quarterly Systems-to-Synthesis Meeting will feature short talks by graduate students and postdoctoral fellows from labs throughout the SDCSB followed by a happy hour. All faculty members and trainees – graduate students, postdoctoral fellows, scientists and staff members – working on SDCSB-related projects are expected to attend.

This meeting is open to the public but seats are limited so be …

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Intellectual Property and Licensing Workshop 2016

Thursday, March 24, 2016 from 12:30 pm – 7 pm

Main Auditorium at the Sanford Consortium for Regenerative Medicine

Organized by Kamala Janiyani

This workshop will bring together intellectual property professionals, entrepreneurs, researchers and students to discuss the recent developments in the area of intellectual property and licensing.

 

Please visit here to register.

 

Schedule

12:30 pm
Registration

1:00 pm
Kamala Janiyani (Ph.D, UC San Diego)
Welcome

1:10 pm
Greg Reilly (Associate Professor, California Western School of Law)
America Invents Act in Review: …

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