Monday, May 8, 2017, from 8:30 am – 4:30 pm

Medical Education & Telemedicine Building, Room 141

Hosted by Helen Sparrow – Ensembl Outreach Officer

European Bioinformatics Institute (EMBL-EBI)

Register for the event here

BRING YOUR OWN LAPTOP

This full-day workshop will provide an introduction to Ensembl (www.ensembl.org), a freely available comprehensive and integrated genomic resource. Ensembl currently has over 80 vertebrate species available, including human genomes, whether in its latest assembly (GRCh38) or the previous ones (GRCh37 and …

Thursday, April 6, 2017, from 1:30 pm to 6:00 pm

UC San Diego – Medical Education & Telemedicine (MET) rooms 143 & 145

The SDCSB’s Quarterly Systems-to-Synthesis Meeting will feature short talks and posters by graduate students and postdoctoral fellows from labs throughout the SDCSB, including a happy hour. All faculty members and trainees – graduate students, postdoctoral fellows, scientists and staff members – working on SDCSB-related projects are expected to attend.

This meeting is open to the public but seats are …

Thursday, March 16, 2017 from 1.30 pm – 6.15 pm

Main Auditorium at the Sanford Consortium for Regenerative Medicine

Organized by Kamala Janiyani

This workshop will bring together inventors, legal and business professionals from the local San Diego community to discuss recent updates in intellectual property law and sponsored research. Speakers will share their thoughts in details followed by Q and A..

Please visit here to register.

Schedule

1.00pm
Registration

1.30pm
Welcome Remarks

1.35pm
April Wurster (Patent Attorney, Viacyte, Inc.)
Patent …

March 3, 2017, from 11 am – 1 pm

MET 145 and BRF2 1102, UC San Diego

Please register for the event here

The San Diego Center for Systems Biology is happy to host Luke Timmerman, author of “The Story of Lee Hood, Pioneer of Automated DNA Sequencing and Systems Biology”.

Lee Hood is best known for leading the team at Caltech in the 1980s that developed the first automated DNA sequencing instrument. It was the tool that paved the way for emerging …

March 27 – 31, 2017, from 10 am – 12 pm

Room 2130, Bonner Hall, UC San Diego

Organizer: Dr. Lev Tsimring, BioCircuits Institute, UC San Diego

The Network Assembly and Mathematical Modeling Core of the San Diego Center for Systems Biology presents a series of hands-on tutorials on kinetic modeling of intracellular dynamical processes and gene regulation. The schedule and topics covered by the tutorials is as follows:

Day 1: Overview
Day 2: Deterministic modeling: model derivation, simulation, and techniques
Day 3: …

Tuesday, January 24, 2017 from 9:30 am – 12:00 pm

UC San Diego Campus, BRF2 room 2A03

Organized by Barry Demchak

Please visit here to register

Cytoscape is the most popular software for analyzing and visualizing molecular networks and biological pathways. Cytoscape has many powerful features for integrating these networks with annotations, gene expression profiles and other state data.

In this clinic, the Cytoscape development team from Trey Ideker’s lab will try something completely new. Attendees at our recent workshops have …

DUE TO POTENTIALLY DANGEROUS WEATHER CONDITIONS NEAR LAKE ARROWHEAD, WE HAVE DECIDED TO CANCEL THIS WEEKEND’S SDCSB RETREAT.

THE FIFTH ANNUAL WINTER Q-BIO MEETING

Quantitative Biology on the Hawaiian Islands
February 21-24, 2017
http://w-qbio.org/

The Winter q-bio meeting brings together scientists and engineers who are interested in all areas of q-bio. Technology is driving revolutionary changes in biology. Systems Biology has arisen as the deduction of interaction networks from -omics data generated in the wake of remarkable technological achievements. Likewise, DNA synthesis technologies are driving the development of Synthetic Biology, whereby engineered circuitry and even entire genomes can be reconstituted from …

Thursday, October 13, 2016, from 1:30 pm to 6:00 pm

Meeting Rooms on Fifteen, 15th Floor of Building 1, Village West

The SDCSB’s Quarterly Systems-to-Synthesis Meeting will feature short talks by graduate students and postdoctoral fellows from labs throughout the SDCSB followed by a happy hour. All faculty members and trainees – graduate students, postdoctoral fellows, scientists and staff members – working on SDCSB-related projects are expected to attend.

This meeting is open to the public but seats are limited so be …

Thursday, October 20, 2016 from 1:30 pm – 6:00 pm

Sanford Consortium for Regenerative Medicine

Organized by Olivier Harismendy, Kristen Jepsen and SDCSB

Sponsored by Illumina, Twist Bioscience, Flu’OMICS, and Agilent Technologies

Missed the event?

Review the pre-workshop installation guidelines here.
View and download the workshop slides here.

Pooled CRISPR based screens have become an important tool for functional genomics. Multiple laboratories in La Jolla are initiating screens and developing standard operating procedures for screen design, execution and analysis. …